STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB75018.1Possible cytochrome c. (217 aa)    
Predicted Functional Partners:
ABB75017.1
Cytochrome c, class I.
    0.964
ABB75572.1
Cytochrome c, class I.
    0.901
ABB74980.1
Pyridine nucleotide-disulfide oxidoreductase, class-II.
   
 
 0.840
ABB75989.1
Cytochrome c, class I.
 
     0.783
ABB75988.1
Cytochrome c, class I.
  
     0.773
ABB73764.1
Cytochrome c, class I.
    0.742
ABB74306.1
Cytochrome c1.
 
  
 0.723
ABB74308.1
Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
  
 0.601
ABB73513.1
Cytochrome c, class I.
 
   
 0.599
ABB73498.1
Putative transmembrane protein.
 
     0.574
Your Current Organism:
Nitrosospira multiformis
NCBI taxonomy Id: 323848
Other names: N. multiformis ATCC 25196, Nitrosospira multiformis ATCC 25196, Nitrosospira multiformis C-71, Nitrosospira multiformis NCIMB 11849, Nitrosospira multiformis NI13, Nitrosospira multiformis str. ATCC 25196, Nitrosospira multiformis strain ATCC 25196
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