STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB75044.1Anti sigma-E protein, RseA. (188 aa)    
Predicted Functional Partners:
ABB75045.1
Sigma E regulatory protein, MucB/RseB.
 
 
 0.999
ABB75043.1
RNA polymerase, sigma-24 subunit, RpoE; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.991
ABB74354.1
RNA polymerase, sigma-24 subunit, RpoE; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.944
ABB75134.1
Sigma-24 (FecI-like); Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.944
ABB75046.1
Peptidase S1C, Do; Belongs to the peptidase S1C family.
  
 
 0.921
ABB74304.1
Stringent starvation protein B.
    
 
 0.890
ABB73818.1
Peptidase S1C, Do; Belongs to the peptidase S1C family.
  
 
 0.828
ABB74114.1
Peptidase S1 and S6, chymotrypsin/Hap; Belongs to the peptidase S1C family.
  
 
 0.828
ABB75963.1
Peptidase S1 and S6, chymotrypsin/Hap.
  
 
 0.828
ABB73326.1
Tetratricopeptide TPR_3.
  
 
 0.733
Your Current Organism:
Nitrosospira multiformis
NCBI taxonomy Id: 323848
Other names: N. multiformis ATCC 25196, Nitrosospira multiformis ATCC 25196, Nitrosospira multiformis C-71, Nitrosospira multiformis NCIMB 11849, Nitrosospira multiformis NI13, Nitrosospira multiformis str. ATCC 25196, Nitrosospira multiformis strain ATCC 25196
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.