STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB75122.1L-lysine 6-monooxygenase (NADPH). (435 aa)    
Predicted Functional Partners:
ABB75121.1
Hypothetical protein.
  
 0.999
ABB75129.1
Amino acid adenylation.
 
 
 0.965
ABB75132.1
MbtH-like protein.
 
  
 0.965
ABB75126.1
Amino acid adenylation.
 
 
 0.944
ABB75120.1
Cyclic peptide transporter.
 
  
 0.932
ABB75127.1
Amino acid adenylation.
 
 
 0.826
ABB75387.1
GCN5-related N-acetyltransferase.
  
  
 0.817
ABB75128.1
Beta-ketoacyl synthase.
 
 
 0.799
ABB75131.1
Thioesterase.
 
  
 0.786
ABB75123.1
TonB-dependent siderophore receptor.
 
   
 0.732
Your Current Organism:
Nitrosospira multiformis
NCBI taxonomy Id: 323848
Other names: N. multiformis ATCC 25196, Nitrosospira multiformis ATCC 25196, Nitrosospira multiformis C-71, Nitrosospira multiformis NCIMB 11849, Nitrosospira multiformis NI13, Nitrosospira multiformis str. ATCC 25196, Nitrosospira multiformis strain ATCC 25196
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.