STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB75472.1Inner membrane protein. (295 aa)    
Predicted Functional Partners:
ABB75473.1
Conserved hypothetical protein.
     0.991
ABB74234.1
Conserved hypothetical protein.
     0.824
ABB75474.1
Phage transcriptional regulator, AlpA.
 
     0.756
ABB75476.1
Phage integrase; Belongs to the 'phage' integrase family.
 
     0.731
ABB73373.1
Phage integrase; Belongs to the 'phage' integrase family.
 
     0.593
ABB73445.1
Hypothetical protein.
 
     0.537
ABB74225.1
Phage integrase; Belongs to the 'phage' integrase family.
 
     0.521
ABB74235.1
Phage transcriptional regulator, AlpA.
 
     0.483
ABB75475.1
Hypothetical protein.
       0.415
Your Current Organism:
Nitrosospira multiformis
NCBI taxonomy Id: 323848
Other names: N. multiformis ATCC 25196, Nitrosospira multiformis ATCC 25196, Nitrosospira multiformis C-71, Nitrosospira multiformis NCIMB 11849, Nitrosospira multiformis NI13, Nitrosospira multiformis str. ATCC 25196, Nitrosospira multiformis strain ATCC 25196
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