STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB75648.1TadE-like protein. (185 aa)    
Predicted Functional Partners:
ABB75646.1
Response regulator receiver domain protein (CheY-like).
  
  
 0.943
ABB75652.1
Flp pilus assembly CpaB.
  
  
 0.921
ABB75644.1
Type II secretion system protein.
  
  
 0.915
ABB75649.1
Putative membrane protein.
  
    0.835
ABB75645.1
Type II secretion system protein E.
  
    0.821
ABB75651.1
Type II and III secretion system protein; Belongs to the bacterial secretin family.
  
  
 0.760
ABB75647.1
TadE-like protein.
       0.740
ABB75643.1
Type II secretion system protein.
  
    0.727
ABB75650.1
Hypothetical protein.
       0.627
ABB75653.1
Peptidase A24A, prepilin type IV.
  
  
 0.557
Your Current Organism:
Nitrosospira multiformis
NCBI taxonomy Id: 323848
Other names: N. multiformis ATCC 25196, Nitrosospira multiformis ATCC 25196, Nitrosospira multiformis C-71, Nitrosospira multiformis NCIMB 11849, Nitrosospira multiformis NI13, Nitrosospira multiformis str. ATCC 25196, Nitrosospira multiformis strain ATCC 25196
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.