node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Shew_0382 | Shew_0383 | Shew_0382 | Shew_0383 | PFAM: nuclease (SNase domain protein); KEGG: noc:Noc_1218 micrococcal nuclease (SNase-like). | PFAM: malic enzyme domain protein; malic enzyme, NAD-binding; KEGG: sfr:Sfri_3757 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)). | 0.486 |
Shew_0382 | Shew_1369 | Shew_0382 | Shew_1369 | PFAM: nuclease (SNase domain protein); KEGG: noc:Noc_1218 micrococcal nuclease (SNase-like). | Flagellar protein export ATPase FliI; KEGG: sdn:Sden_1327 ATPase FliI/YscN; TIGRFAM: ATPase, FliI/YscN family; flagellar protein export ATPase FliI; PFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region; H+-transporting two-sector ATPase, alpha/beta subunit domain protein; SMART: AAA ATPase. | 0.426 |
Shew_0382 | Shew_2887 | Shew_0382 | Shew_2887 | PFAM: nuclease (SNase domain protein); KEGG: noc:Noc_1218 micrococcal nuclease (SNase-like). | KEGG: she:Shewmr4_3149 sterol desaturase family protein. | 0.483 |
Shew_0382 | rnpA | Shew_0382 | Shew_3868 | PFAM: nuclease (SNase domain protein); KEGG: noc:Noc_1218 micrococcal nuclease (SNase-like). | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.662 |
Shew_0382 | rpmE | Shew_0382 | Shew_0381 | PFAM: nuclease (SNase domain protein); KEGG: noc:Noc_1218 micrococcal nuclease (SNase-like). | LSU ribosomal protein L31P; Binds the 23S rRNA. | 0.512 |
Shew_0382 | topA | Shew_0382 | Shew_2224 | PFAM: nuclease (SNase domain protein); KEGG: noc:Noc_1218 micrococcal nuclease (SNase-like). | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.426 |
Shew_0383 | Shew_0382 | Shew_0383 | Shew_0382 | PFAM: malic enzyme domain protein; malic enzyme, NAD-binding; KEGG: sfr:Sfri_3757 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)). | PFAM: nuclease (SNase domain protein); KEGG: noc:Noc_1218 micrococcal nuclease (SNase-like). | 0.486 |
Shew_1369 | Shew_0382 | Shew_1369 | Shew_0382 | Flagellar protein export ATPase FliI; KEGG: sdn:Sden_1327 ATPase FliI/YscN; TIGRFAM: ATPase, FliI/YscN family; flagellar protein export ATPase FliI; PFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region; H+-transporting two-sector ATPase, alpha/beta subunit domain protein; SMART: AAA ATPase. | PFAM: nuclease (SNase domain protein); KEGG: noc:Noc_1218 micrococcal nuclease (SNase-like). | 0.426 |
Shew_2887 | Shew_0382 | Shew_2887 | Shew_0382 | KEGG: she:Shewmr4_3149 sterol desaturase family protein. | PFAM: nuclease (SNase domain protein); KEGG: noc:Noc_1218 micrococcal nuclease (SNase-like). | 0.483 |
rnpA | Shew_0382 | Shew_3868 | Shew_0382 | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | PFAM: nuclease (SNase domain protein); KEGG: noc:Noc_1218 micrococcal nuclease (SNase-like). | 0.662 |
rnpA | rpmE | Shew_3868 | Shew_0381 | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | LSU ribosomal protein L31P; Binds the 23S rRNA. | 0.495 |
rpmE | Shew_0382 | Shew_0381 | Shew_0382 | LSU ribosomal protein L31P; Binds the 23S rRNA. | PFAM: nuclease (SNase domain protein); KEGG: noc:Noc_1218 micrococcal nuclease (SNase-like). | 0.512 |
rpmE | rnpA | Shew_0381 | Shew_3868 | LSU ribosomal protein L31P; Binds the 23S rRNA. | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.495 |
topA | Shew_0382 | Shew_2224 | Shew_0382 | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | PFAM: nuclease (SNase domain protein); KEGG: noc:Noc_1218 micrococcal nuclease (SNase-like). | 0.426 |