node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Shew_1187 | rlmL | Shew_1187 | Shew_1812 | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | Putative RNA methylase; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family. | 0.713 |
Shew_1187 | uppS | Shew_1187 | Shew_2631 | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | Undecaprenyl pyrophosphate synthetase; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di- trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide. | 0.526 |
Shew_1813 | Shew_1814 | Shew_1813 | Shew_1814 | PFAM: glutaredoxin 2; KEGG: shm:Shewmr7_1608 glutaredoxin 2. | PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: she:Shewmr4_1542 ABC transporter-related protein. | 0.802 |
Shew_1813 | Shew_1815 | Shew_1813 | Shew_1815 | PFAM: glutaredoxin 2; KEGG: shm:Shewmr7_1608 glutaredoxin 2. | KEGG: shm:Shewmr7_1610 hypothetical protein. | 0.729 |
Shew_1813 | rlmL | Shew_1813 | Shew_1812 | PFAM: glutaredoxin 2; KEGG: shm:Shewmr7_1608 glutaredoxin 2. | Putative RNA methylase; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family. | 0.814 |
Shew_1814 | Shew_1813 | Shew_1814 | Shew_1813 | PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: she:Shewmr4_1542 ABC transporter-related protein. | PFAM: glutaredoxin 2; KEGG: shm:Shewmr7_1608 glutaredoxin 2. | 0.802 |
Shew_1814 | Shew_1815 | Shew_1814 | Shew_1815 | PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: she:Shewmr4_1542 ABC transporter-related protein. | KEGG: shm:Shewmr7_1610 hypothetical protein. | 0.729 |
Shew_1814 | Shew_3553 | Shew_1814 | Shew_3553 | PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: she:Shewmr4_1542 ABC transporter-related protein. | TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor, GTP-binding; elongation factor Tu, domain 2 protein; KEGG: shm:Shewmr7_3718 GTP-binding protein TypA. | 0.527 |
Shew_1814 | rlmL | Shew_1814 | Shew_1812 | PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: she:Shewmr4_1542 ABC transporter-related protein. | Putative RNA methylase; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family. | 0.863 |
Shew_1815 | Shew_1813 | Shew_1815 | Shew_1813 | KEGG: shm:Shewmr7_1610 hypothetical protein. | PFAM: glutaredoxin 2; KEGG: shm:Shewmr7_1608 glutaredoxin 2. | 0.729 |
Shew_1815 | Shew_1814 | Shew_1815 | Shew_1814 | KEGG: shm:Shewmr7_1610 hypothetical protein. | PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: she:Shewmr4_1542 ABC transporter-related protein. | 0.729 |
Shew_1815 | rlmL | Shew_1815 | Shew_1812 | KEGG: shm:Shewmr7_1610 hypothetical protein. | Putative RNA methylase; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family. | 0.765 |
Shew_3553 | Shew_1814 | Shew_3553 | Shew_1814 | TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor, GTP-binding; elongation factor Tu, domain 2 protein; KEGG: shm:Shewmr7_3718 GTP-binding protein TypA. | PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: she:Shewmr4_1542 ABC transporter-related protein. | 0.527 |
Shew_3553 | pnp | Shew_3553 | Shew_2822 | TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor, GTP-binding; elongation factor Tu, domain 2 protein; KEGG: shm:Shewmr7_3718 GTP-binding protein TypA. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.522 |
Shew_3553 | rlmL | Shew_3553 | Shew_1812 | TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor, GTP-binding; elongation factor Tu, domain 2 protein; KEGG: shm:Shewmr7_3718 GTP-binding protein TypA. | Putative RNA methylase; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family. | 0.562 |
argS | pnp | Shew_0378 | Shew_2822 | KEGG: shm:Shewmr7_0456 arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.573 |
argS | rlmL | Shew_0378 | Shew_1812 | KEGG: shm:Shewmr7_0456 arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase. | Putative RNA methylase; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family. | 0.555 |
argS | thiI | Shew_0378 | Shew_2766 | KEGG: shm:Shewmr7_0456 arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase. | Thiamine biosynthesis/tRNA modification protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | 0.441 |
pnp | Shew_3553 | Shew_2822 | Shew_3553 | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor, GTP-binding; elongation factor Tu, domain 2 protein; KEGG: shm:Shewmr7_3718 GTP-binding protein TypA. | 0.522 |
pnp | argS | Shew_2822 | Shew_0378 | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | KEGG: shm:Shewmr7_0456 arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase. | 0.573 |