STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Shew_2759PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; KEGG: shm:Shewmr7_2790 peptidase S9, prolyl oligopeptidase active site domain protein. (937 aa)    
Predicted Functional Partners:
Shew_0576
PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9B, dipeptidylpeptidase IV domain protein; KEGG: she:Shewmr4_0608 peptidase S9, prolyl oligopeptidase active site domain protein.
  
     0.700
Shew_3485
PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; dienelactone hydrolase; KEGG: son:SO4252 prolyl oligopeptidase family protein.
  
     0.682
Shew_1234
Peptidase S41; Degrades oligopeptides; Belongs to the peptidase S41B family.
  
     0.610
Shew_2758
KEGG: gvi:gll2461 hypothetical protein.
       0.503
Shew_1118
KEGG: shm:Shewmr7_3014 hypothetical protein.
  
     0.493
Shew_1815
KEGG: shm:Shewmr7_1610 hypothetical protein.
  
     0.475
Shew_2586
PFAM: amidohydrolase; Amidohydrolase 3; KEGG: she:Shewmr4_1350 amidohydrolase.
 
     0.474
Shew_0460
KEGG: sfr:Sfri_3501 hypothetical protein.
  
     0.451
Shew_2587
KEGG: son:SO3149 hypothetical protein.
 
     0.451
Shew_2553
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: shm:Shewmr7_2667 short-chain dehydrogenase/reductase SDR.
  
     0.441
Your Current Organism:
Shewanella loihica
NCBI taxonomy Id: 323850
Other names: S. loihica PV-4, Shewanella loihica PV-4, Shewanella loihica str. PV-4, Shewanella loihica strain PV-4, Shewanella sp. PV-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.