rraA protein (Shewanella loihica) - STRING interaction network

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rraA

Protein of unknown function 1935; Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome. Modulates RNA-binding and helicase activities of the degradosome. (161 aa)

Predicted Functional Partners:

rhlE

0.518

Shew_1276

0.460

Shew_3367

0.450

Shew_2559

0.427

Your Current Organism:

Shewanella loihica

NCBI taxonomy Id: 323850
Other names: S. loihica PV-4, Shewanella loihica PV-4, Shewanella loihica str. PV-4, Shewanella loihica strain PV-4, Shewanella sp. PV-4

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Shew_1276	Shew_2559	Shew_1276	Shew_2559	TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: she:Shewmr4_2766 isocitrate lyase.	KEGG: sfr:Sfri_3904 malate synthase.	0.943
Shew_1276	rraA	Shew_1276	Shew_3370	TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: she:Shewmr4_2766 isocitrate lyase.	Protein of unknown function 1935; Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome. Modulates RNA-binding and helicase activities of the degradosome.	0.460
Shew_2559	Shew_1276	Shew_2559	Shew_1276	KEGG: sfr:Sfri_3904 malate synthase.	TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: she:Shewmr4_2766 isocitrate lyase.	0.943
Shew_2559	rraA	Shew_2559	Shew_3370	KEGG: sfr:Sfri_3904 malate synthase.	Protein of unknown function 1935; Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome. Modulates RNA-binding and helicase activities of the degradosome.	0.427
Shew_3367	rraA	Shew_3367	Shew_3370	KEGG: sfr:Sfri_0480 hypothetical protein.	Protein of unknown function 1935; Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome. Modulates RNA-binding and helicase activities of the degradosome.	0.450
rhlE	rraA	Shew_0604	Shew_3370	DEAD/DEAH box helicase domain protein; DEAD-box RNA helicase involved in ribosome assembly. Has RNA- dependent ATPase activity and unwinds double-stranded RNA.	Protein of unknown function 1935; Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome. Modulates RNA-binding and helicase activities of the degradosome.	0.518
rraA	Shew_1276	Shew_3370	Shew_1276	Protein of unknown function 1935; Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome. Modulates RNA-binding and helicase activities of the degradosome.	TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: she:Shewmr4_2766 isocitrate lyase.	0.460
rraA	Shew_2559	Shew_3370	Shew_2559	Protein of unknown function 1935; Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome. Modulates RNA-binding and helicase activities of the degradosome.	KEGG: sfr:Sfri_3904 malate synthase.	0.427
rraA	Shew_3367	Shew_3370	Shew_3367	Protein of unknown function 1935; Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome. Modulates RNA-binding and helicase activities of the degradosome.	KEGG: sfr:Sfri_0480 hypothetical protein.	0.450
rraA	rhlE	Shew_3370	Shew_0604	Protein of unknown function 1935; Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome. Modulates RNA-binding and helicase activities of the degradosome.	DEAD/DEAH box helicase domain protein; DEAD-box RNA helicase involved in ribosome assembly. Has RNA- dependent ATPase activity and unwinds double-stranded RNA.	0.518

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