STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS98965.1PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: smd:Smed_3963 binding-protein-dependent transport systems inner membrane component. (608 aa)    
Predicted Functional Partners:
ACS98964.1
PFAM: extracellular solute-binding protein family 1; KEGG: sme:SM_b20158 ABC transporter periplasmic substrate-binding protein.
 
 
 0.993
ACT00629.1
PFAM: extracellular solute-binding protein family 1; KEGG: baa:BA_2248 bacterial extracellular solute-binding protein.
 
 
 0.974
ACT02975.1
TIGRFAM: 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component; PFAM: extracellular solute-binding protein family 1; KEGG: sfu:Sfum_2899 extracellular solute-binding protein, family 1.
 
 
 0.961
ACT00630.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kpe:KPK_2471 ABC transporter, permease protein.
  
  
 
0.928
ACT02973.1
TIGRFAM: 2-aminoethylphosphonate ABC transport system, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bar:GBAA1339 iron compound ABC transporter, permease protein, putative.
  
  
 
0.922
ACT02974.1
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: vsa:VSAL_II0810 ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.922
ACS98966.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mlo:mlr8490 ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
   
 0.859
ACS98967.1
PFAM: PHP domain protein; KEGG: dal:Dalk_4877 PHP domain protein.
       0.803
ACS98968.1
PFAM: sugar isomerase (SIS); KEGG: bpy:Bphyt_3133 transcriptional regulator, RpiR family.
       0.699
ACT01549.1
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: avi:Avi_8306 ABC transporter nucleotide binding/ATPase protein; Belongs to the ABC transporter superfamily.
 
  
 0.685
Your Current Organism:
Paenibacillus sp. JDR2
NCBI taxonomy Id: 324057
Other names: P. sp. JDR-2, Paenibacillus sp. JDR-2
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