STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS99108.1Hypothetical protein. (548 aa)    
Predicted Functional Partners:
ACS99109.1
Hypothetical protein.
      
0.668
ACS99105.1
PFAM: UbiA prenyltransferase; KEGG: noc:Noc_1948 UbiA prenyltransferase; Belongs to the UbiA prenyltransferase family.
       0.591
ACS99106.1
KEGG: cvi:CV_0751 hypothetical protein.
       0.572
ACS99107.1
PFAM: acid phosphatase/vanadium-dependent haloperoxidase related; KEGG: pnu:Pnuc_0330 acid phosphatase/vanadium-dependent haloperoxidase related.
       0.572
ACS99110.1
PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: bha:BH3447 two-component sensor histidine kinase.
       0.421
ACS99111.1
Two component transcriptional regulator, AraC family; PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: bha:BH2109 hypothetical protein.
       0.421
Your Current Organism:
Paenibacillus sp. JDR2
NCBI taxonomy Id: 324057
Other names: P. sp. JDR-2, Paenibacillus sp. JDR-2
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