STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACT00028.1KEGG: bar:GBAA1837 hypothetical protein. (98 aa)    
Predicted Functional Partners:
ACT02991.1
PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pca:Pcar_1103 fused recombination factor protein RarA/unknown domain-containing protein.
       0.567
ACS99213.1
Transcriptional regulator, AraC family; PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bsu:BSU05170 hypothetical protein.
  
     0.507
ACT02677.1
Transcriptional regulator, AraC family; PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bsu:BSU05170 hypothetical protein.
  
     0.476
ACT00565.1
PFAM: Collagen triple helix repeat; KEGG: mlo:mlr0587 hypothetical protein.
  
     0.450
ACS99672.1
KEGG: bha:BH2017 hypothetical protein.
  
     0.444
ACT01445.1
KEGG: bsu:BSU27130 hypothetical protein.
 
     0.420
ACS99918.1
PFAM: type II secretion system protein; KEGG: hypothetical protein.
  
     0.418
ACT02423.1
KEGG: bsu:BSU31020 hypothetical protein.
  
     0.411
ACT01739.1
PFAM: DinB family protein; KEGG: bar:GBAA2558 hypothetical protein.
  
     0.409
ACT01755.1
PFAM: DinB family protein; KEGG: bar:GBAA2558 hypothetical protein.
  
     0.402
Your Current Organism:
Paenibacillus sp. JDR2
NCBI taxonomy Id: 324057
Other names: P. sp. JDR-2, Paenibacillus sp. JDR-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.