STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACT00090.1KEGG: bha:BH3337 hypothetical protein. (90 aa)    
Predicted Functional Partners:
ACT00091.1
KEGG: bha:BH3432 hypothetical protein.
 
     0.891
ACT00092.1
PFAM: HRDC domain protein; SMART: HRDC domain protein; KEGG: mgm:Mmc1_1442 ATP-dependent DNA helicase RecQ.
       0.713
ACT04743.1
PFAM: transcription activator effector binding; KEGG: bha:BH2119 hypothetical protein.
  
     0.706
ACT03589.1
Hypothetical protein; KEGG: noc:Noc_1090 chain A, red copper protein nitrosocyanin.
  
     0.705
ACT02411.1
KEGG: bsu:BSU14940 hypothetical protein.
  
     0.679
ACT01053.1
KEGG: bar:GBAA1529 hypothetical protein.
  
     0.664
ACT04250.1
KEGG: bar:GBAA0149 KinB signaling pathway activation protein.
  
     0.649
ACT04585.1
KEGG: bha:BH1915 small acid soluble protein.
  
     0.635
ACT03396.1
KEGG: baa:BA_0003 hypothetical protein.
  
     0.610
ACT01088.1
PFAM: cytochrome c class I; KEGG: baa:BA_2065 cytochrome b(C-terminal)/b6/petD.
  
     0.597
Your Current Organism:
Paenibacillus sp. JDR2
NCBI taxonomy Id: 324057
Other names: P. sp. JDR-2, Paenibacillus sp. JDR-2
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.