STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACT00235.1PFAM: glycoside hydrolase family 25; SMART: glycoside hydrolase family 25; KEGG: ecg:E2348C_2247 predicted hydrolase. (269 aa)    
Predicted Functional Partners:
ACT00234.1
TIGRFAM: toxin secretion/phage lysis holin; PFAM: Holin toxin secretion/phage lysis; KEGG: bha:BH0965 hypothetical protein.
       0.781
ACT00231.1
Hypothetical protein; KEGG: pfl:PFL_0133 calcium-binding outer membrane-like protein.
       0.667
ACT00230.1
Hypothetical protein.
       0.661
ACT00232.1
Hypothetical protein.
       0.661
ACT00233.1
TIGRFAM: phage uncharacterized protein, XkdX family.
       0.661
ACT00228.1
Hypothetical protein.
       0.639
ACT00229.1
Hypothetical protein.
       0.639
ACT00226.1
Hypothetical protein.
       0.636
ACT00227.1
Hypothetical protein.
       0.618
ACT00225.1
Hypothetical protein.
       0.609
Your Current Organism:
Paenibacillus sp. JDR2
NCBI taxonomy Id: 324057
Other names: P. sp. JDR-2, Paenibacillus sp. JDR-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.