STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACT00327.1PFAM: S-layer domain protein; KEGG: baa:BA_1454 Amidase_2, N-acetylmuramoyl-L-alanine amidase. (336 aa)    
Predicted Functional Partners:
ACT03334.1
PFAM: S-layer domain protein; KEGG: hypothetical protein.
 
    0.773
ACT04391.1
PFAM: polysaccharide pyruvyl transferase; KEGG: baa:BA_1468 hypothetical protein.
  
     0.771
ACT02931.1
PFAM: copper amine oxidase domain protein; KEGG: hypothetical protein.
  
     0.769
ACS99096.1
PFAM: copper amine oxidase domain protein.
  
     0.767
ACT03610.1
PFAM: copper amine oxidase domain protein; lipolytic protein G-D-S-L family; KEGG: hypothetical protein.
  
 
   0.744
ACT04380.1
PFAM: copper amine oxidase domain protein; KEGG: hypothetical protein.
 
     0.744
ACT01513.1
PFAM: S-layer domain protein; KEGG: vei:Veis_1974 hypothetical protein.
  
     0.736
ACS99820.1
PFAM: S-layer domain protein; KEGG: hypothetical protein.
  
     0.731
ACT03472.1
PFAM: copper amine oxidase domain protein; KEGG: hypothetical protein.
  
     0.711
ACT03591.1
PFAM: S-layer domain protein; Propeptide PepSY amd peptidase M4; KEGG: hypothetical protein.
  
     0.689
Your Current Organism:
Paenibacillus sp. JDR2
NCBI taxonomy Id: 324057
Other names: P. sp. JDR-2, Paenibacillus sp. JDR-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.