STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACT00975.1KEGG: bsu:BSU24110 hypothetical protein. (97 aa)    
Predicted Functional Partners:
ACT01053.1
KEGG: bar:GBAA1529 hypothetical protein.
  
     0.771
ACT02538.1
KEGG: bsu:BSU24780 hypothetical protein.
  
     0.771
ACT03443.1
KEGG: baa:BA_0030 hypothetical protein.
  
     0.771
ACT02411.1
KEGG: bsu:BSU14940 hypothetical protein.
  
     0.769
ACT04250.1
KEGG: bar:GBAA0149 KinB signaling pathway activation protein.
  
     0.769
ACS99775.1
KEGG: bsu:BSU08740 hypothetical protein.
  
     0.768
ACS99927.1
KEGG: bar:GBAA3719 hypothetical protein.
  
     0.755
ACT00976.1
TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; KEGG: bar:GBAA4385 dihydrolipoamide dehydrogenase.
       0.746
ACT03911.1
TIGRFAM: cytochrome c oxidase assembly factor CtaG; KEGG: bar:GBAA4150 hypothetical protein.
  
     0.737
ACT01020.1
PFAM: ResB family protein; KEGG: bsu:BSU23140 required for cytochrome c synthesis.
  
     0.732
Your Current Organism:
Paenibacillus sp. JDR2
NCBI taxonomy Id: 324057
Other names: P. sp. JDR-2, Paenibacillus sp. JDR-2
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