STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACT01650.1PFAM: GCN5-related N-acetyltransferase; KEGG: bar:GBAA2699 acetyltransferase. (156 aa)    
Predicted Functional Partners:
ACT01651.1
PFAM: extracellular solute-binding protein family 5; KEGG: baa:BA_1422 SBP_bac_5, bacterial extracellular solute-binding proteins, family 5.
       0.496
ACS99582.1
DNA polymerase beta domain protein region; Mediates bacterial resistance to the antibiotics streptomycin and spectomycin.
 
     0.481
ACT01906.1
KEGG: vfm:VFMJ11_1749 hypothetical protein.
  
     0.460
ACT04700.1
KEGG: dal:Dalk_4101 hypothetical protein.
  
 
 
 0.446
ACT00390.1
PFAM: extracellular solute-binding protein family 1; KEGG: hypothetical protein.
  
     0.439
ACS99955.1
PFAM: major facilitator superfamily MFS_1; KEGG: mmw:Mmwyl1_1174 major facilitator transporter.
  
    0.418
ACT00758.1
Hypothetical protein; KEGG: aca:ACP_2963 prepilin-type N-terminal cleavage/methylation domain protein.
  
     0.415
ACT00393.1
PFAM: Xylose isomerase domain protein TIM barrel.
  
     0.403
ACT04702.1
KEGG: dat:HRM2_21170 hypothetical protein.
 
     0.402
Your Current Organism:
Paenibacillus sp. JDR2
NCBI taxonomy Id: 324057
Other names: P. sp. JDR-2, Paenibacillus sp. JDR-2
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