STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACT01712.1PFAM: periplasmic solute binding protein; KEGG: bsu:BSU02850 hypothetical protein; Belongs to the bacterial solute-binding protein 9 family. (315 aa)    
Predicted Functional Partners:
ACT01710.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bsu:BSU02860 hypothetical protein.
 
 
 0.995
ACT01711.1
PFAM: ABC-3 protein; transport system permease protein; KEGG: bsu:BSU02870 hypothetical protein.
 
 
 0.995
ACT00931.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bar:GBAA4505 cation ABC transporter, ATP-binding protein, putative.
 
 
 0.988
ACT00932.1
PFAM: ABC-3 protein; inner-membrane translocator; KEGG: bha:BH1395 ABC transporter (permease).
 
 0.979
ACT00930.1
PFAM: periplasmic solute binding protein; KEGG: bsu:BSU02850 hypothetical protein; Belongs to the bacterial solute-binding protein 9 family.
  
  
 
0.909
ACT03479.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bsu:BSU30760 manganese ABC transporter ATP-binding protein.
 
  
 0.908
ACT03478.1
PFAM: ABC-3 protein; transport system permease protein; KEGG: bsu:BSU30750 manganese ABC transporter membrane protein.
  
 0.887
ACT03477.1
PFAM: ABC-3 protein; KEGG: bsu:BSU30740 manganese ABC transporter.
  
 0.886
ACT01713.1
PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: bsu:BSU03360 hypothetical protein.
  
  
 0.780
rpmB
TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28; KEGG: bha:BH2500 50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
 
  
 0.563
Your Current Organism:
Paenibacillus sp. JDR2
NCBI taxonomy Id: 324057
Other names: P. sp. JDR-2, Paenibacillus sp. JDR-2
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.