STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACT01724.1PFAM: periplasmic binding protein; KEGG: bsu:BSU33320 ferrichrome ABC transporter (ferrichrome-binding protein). (325 aa)    
Predicted Functional Partners:
ACT04245.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bsu:BSU33290 ferrichrome ABC transporter ATP-binding protein.
 
 
 0.849
ACT02989.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bsu:BSU32940 hypothetical protein.
 
 
 0.797
ACT01725.1
Transcriptional regulator, AraC family; PFAM: periplasmic binding protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bsu:BSU01640 hypothetical protein.
  
  
 0.783
ACT03742.1
PFAM: transport system permease protein; KEGG: bsu:BSU33310 ferrichrome ABC transporter (permease); Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.765
ACS99372.1
PFAM: transport system permease protein; ABC-3 protein; KEGG: bar:GBAA3534 iron compound ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.745
ACS99467.1
PFAM: ABC transporter related; Antibiotic biosynthesis monooxygenase; SMART: AAA ATPase; KEGG: bha:BH3292 ferrichrome ABC transporter ATP-binding protein.
 
 
 0.737
ACS99474.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bar:GBAA4784 iron compound ABC transporter, ATP-binding protein.
 
 
 0.726
ACS98886.1
PFAM: transport system permease protein; KEGG: bar:GBAA3534 iron compound ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.717
ACS99373.1
PFAM: transport system permease protein; KEGG: bha:BH1082 ferrichrome ABC transporter (permease); Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.710
ACT03741.1
PFAM: transport system permease protein; KEGG: bha:BH1082 ferrichrome ABC transporter (permease); Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.710
Your Current Organism:
Paenibacillus sp. JDR2
NCBI taxonomy Id: 324057
Other names: P. sp. JDR-2, Paenibacillus sp. JDR-2
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