STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACT02229.1PFAM: extracellular solute-binding protein family 1; KEGG: rfr:Rfer_0954 extracellular solute-binding protein. (439 aa)    
Predicted Functional Partners:
ACT02240.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bsu:BSU07110 transmembrane lipoprotein.
   
 
  0.900
ACT02227.1
Two component transcriptional regulator, AraC family; PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn-helix- domain containing protein AraC type; KEGG: hypothetical protein.
 
     0.827
ACT02228.1
Putative sensor with HAMP domain; PFAM: histidine kinase internal region; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: bha:BH3447 two-component sensor histidine kinase.
       0.786
ACT02226.1
TIGRFAM: gluconate transporter; PFAM: Gluconate transporter; Citrate transporter; KEGG: rpi:Rpic_4193 gluconate transporter.
       0.727
ACT04176.1
PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH1864 hypothetical protein.
  
     0.665
ACT03264.1
PFAM: extracellular solute-binding protein family 1; KEGG: mlo:mll4149 sugar ABC transporter, (sugar-binding protein).
  
     0.601
ACT02225.1
TIGRFAM: gluconate kinase; PFAM: carbohydrate kinase FGGY; KEGG: bar:GBAA3428 gluconate kinase; Belongs to the FGGY kinase family.
  
    0.582
ACS99834.1
PFAM: extracellular solute-binding protein family 1; KEGG: smd:Smed_4916 extracellular solute-binding protein.
  
     0.567
ACS99843.1
Hypothetical protein; KEGG: sus:Acid_2625 PA14 domain-containing protein.
  
     0.548
ACT00598.1
PFAM: extracellular solute-binding protein family 1; KEGG: hypothetical protein.
  
     0.541
Your Current Organism:
Paenibacillus sp. JDR2
NCBI taxonomy Id: 324057
Other names: P. sp. JDR-2, Paenibacillus sp. JDR-2
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