STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACT02608.1Transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: she:Shewmr4_0088 MerR family transcriptional regulator. (119 aa)    
Predicted Functional Partners:
ACT02609.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ank:AnaeK_2444 short-chain dehydrogenase/reductase SDR.
       0.785
ACT00353.1
Transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: nmn:NMCC_1216 MerR family transcriptional regulator.
  
     0.773
ACT00305.1
Transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: ngk:NGK_1315 putative MerR-family transcriptional regulator.
  
     0.771
ACT00682.1
Transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: msu:MS1385 SoxR protein.
  
     0.770
ACT02323.1
Transcriptional regulator, MerR family; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR; KEGG: bte:BTH_II2041 Cu(I)-responsive transcriptional regulator.
  
   
 0.690
ACT00143.1
Transcriptional regulator, MerR family; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; SMART: regulatory protein MerR; KEGG: vfi:VF_0782 DNA-binding transcriptional activator of copper-responsive regulon genes.
  
   
 0.663
ACT04730.1
Transcriptional regulator, MerR family; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; SMART: regulatory protein MerR; KEGG: vsa:VSAL_I0803 HTH-type transcriptional regulator CueR (copper export regulator).
  
   
 0.648
ACS99600.1
Transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: baa:BA_0264 HTH_MERR, helix_turn_helix, mercury resistance.
  
   
 0.595
ACT02607.1
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein; KEGG: oca:OCAR_4711 DNA-binding protein.
  
  
 0.584
ACT03159.1
Transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: bha:BH3858 MerR family transcriptional regulator.
  
   
 0.584
Your Current Organism:
Paenibacillus sp. JDR2
NCBI taxonomy Id: 324057
Other names: P. sp. JDR-2, Paenibacillus sp. JDR-2
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