STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACT03281.1PFAM: protein of unknown function UPF0027; KEGG: bha:BH1789 hypothetical protein. (412 aa)    
Predicted Functional Partners:
ACT03567.1
KEGG: baa:BA_0936 hypothetical protein.
 
    0.836
kptA
Phosphotransferase KptA/Tpt1; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase.
 
   
 0.671
ACT04747.1
PFAM: conserved hypothetical protein; KEGG: pau:PA14_60590 hypothetical protein.
 
     0.507
ACT03569.1
KEGG: bvi:Bcep1808_1333 putative transcriptional regulator.
 
     0.503
ACT03282.1
PFAM: glycoside hydrolase family 4; KEGG: atc:AGR_L_446 alpha-galactosidase (melibiase).
       0.480
ACT03568.1
PFAM: band 7 protein; SMART: band 7 protein; KEGG: bam:Bamb_5433 band 7 protein.
 
   0.467
ACT04748.1
PFAM: NUDIX hydrolase; KEGG: mpo:Mpop_4449 NUDIX hydrolase; Belongs to the Nudix hydrolase family.
  
     0.439
ACT04082.1
Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; Tetracyclin repressor domain protein; KEGG: eum:p1ECUMN_0055 tetracycline repressor protein class B from transposon Tn10.
  
     0.422
prfB
Hypothetical protein; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
  
  
 0.404
Your Current Organism:
Paenibacillus sp. JDR2
NCBI taxonomy Id: 324057
Other names: P. sp. JDR-2, Paenibacillus sp. JDR-2
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