STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACT03775.1Hypothetical protein; KEGG: bba:Bd2565 phage related tail fibre protein. (488 aa)    
Predicted Functional Partners:
ACT03776.1
KEGG: bsu:BSU12740 hypothetical protein.
 
  
 0.972
ACT03781.1
KEGG: bsu:BSU25990 hypothetical protein.
 
  
 0.962
ACT03788.1
KEGG: bsu:BSU12650 hypothetical protein.
 
  
 0.909
ACT03783.1
KEGG: bsu:BSU12700 hypothetical protein.
 
     0.853
ACT03784.1
PFAM: Peptidoglycan-binding LysM; KEGG: bsu:BSU26020 hypothetical protein.
 
     0.829
ACT03780.1
PFAM: Baseplate J family protein; KEGG: bsu:BSU25980 hypothetical protein.
 
    0.823
ACT03778.1
KEGG: nwi:Nwi_0791 hypothetical protein.
  
    0.808
ACT03777.1
PFAM: tail fiber repeat 2 protein; KEGG: ect:ECIAI39_1973 putative side tail fiber protein homolog from lambdoid prophage.
       0.791
ACT03782.1
KEGG: bsu:BSU26000 hypothetical protein.
       0.791
ACT03779.1
PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II.
       0.777
Your Current Organism:
Paenibacillus sp. JDR2
NCBI taxonomy Id: 324057
Other names: P. sp. JDR-2, Paenibacillus sp. JDR-2
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