STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACT03842.1TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bsu:BSU29360 hypothetical protein. (262 aa)    
Predicted Functional Partners:
ACT03840.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bar:GBAA0857 amino acid ABC transporter ATP-binding protein.
 0.997
ACT03843.1
PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: bsu:BSU29370 hypothetical protein.
 0.994
ACS99735.1
PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: bha:BH1461 ABC transporter (substrate-binding protein); Belongs to the bacterial solute-binding protein 3 family.
 
 0.984
ACT03841.1
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bsu:BSU29350 hypothetical protein.
 
  
 
0.984
ACT01867.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bsu:BSU03590 hypothetical protein.
 
 0.911
ACT01865.1
PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: ara:Arad_4705 amino acid ABC transporter; Belongs to the bacterial solute-binding protein 3 family.
 
 0.904
ACS99737.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO_1042 amino acid ABC transporter, ATP-binding protein.
 
 0.902
ACT01523.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bsu:BSU27430 glutamine ABC transporter ATP-binding protein.
 
 0.902
ACT01524.1
PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; KEGG: baa:BA_1224 bacterial periplasmic substrate-binding proteins.
 
 0.853
ACT03844.1
PFAM: GCN5-related N-acetyltransferase; KEGG: bsu:BSU39510 hypothetical protein.
 
     0.821
Your Current Organism:
Paenibacillus sp. JDR2
NCBI taxonomy Id: 324057
Other names: P. sp. JDR-2, Paenibacillus sp. JDR-2
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