STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACT03939.1PFAM: inner-membrane translocator; KEGG: vei:Veis_1087 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (338 aa)    
Predicted Functional Partners:
rbsA-2
ABC transporter related; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 0.988
ACT03938.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: rfr:Rfer_3131 periplasmic binding protein/LacI transcriptional regulator.
 0.986
ACT03941.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: hap:HAPS_1725 ABC D-ribose transporter periplasmic-binding compoent RbsB.
 0.982
ACT02613.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bsu:BSU35960 ribose ABC transporter (ribose-binding protein).
 0.980
rbsA
ABC transporter related; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 0.977
ACT00019.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bha:BH3840 sugar ABC transporter (sugar-binding protein).
 
 0.972
ACT00510.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bha:BH3840 sugar ABC transporter (sugar-binding protein).
 0.972
ACT02954.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: smd:Smed_3227 periplasmic binding protein/LacI transcriptional regulator.
 
 0.972
ACS99343.1
KEGG: bha:BH3448 sugar ABC transporter (sugar-binding protein).
 0.970
ACS99652.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bha:BH3840 sugar ABC transporter (sugar-binding protein).
 
 0.959
Your Current Organism:
Paenibacillus sp. JDR2
NCBI taxonomy Id: 324057
Other names: P. sp. JDR-2, Paenibacillus sp. JDR-2
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