STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQZ89055.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (452 aa)    
Predicted Functional Partners:
OQZ89054.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.840
OQZ89328.1
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.483
OQZ89052.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.471
OQZ91690.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.460
OQZ89053.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.458
OQZ90452.1
Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.439
OQZ92083.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.405
Your Current Organism:
Mycobacterium alsense
NCBI taxonomy Id: 324058
Other names: CCUG 56586, DSM 45230, M. alsense, Mycobacterium alsense Tortoli et al. 2016, Mycobacterium alsiense, Mycobacterium sp. 1137317.9, Mycobacterium sp. E2978
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