STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQZ88855.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (783 aa)    
Predicted Functional Partners:
OQZ88853.1
SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.884
OQZ88854.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.865
OQZ89571.1
Proteasome protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.519
OQZ88972.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.490
OQZ90267.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.486
OQZ88252.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.440
OQZ88251.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.439
Your Current Organism:
Mycobacterium alsense
NCBI taxonomy Id: 324058
Other names: CCUG 56586, DSM 45230, M. alsense, Mycobacterium alsense Tortoli et al. 2016, Mycobacterium alsiense, Mycobacterium sp. 1137317.9, Mycobacterium sp. E2978
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.