STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_0004PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rrs:RoseRS_3893 protein kinase. (509 aa)    
Predicted Functional Partners:
Caur_1132
PFAM: Stage II sporulation E family protein; Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: rca:Rcas_0099 protein serine/threonine phosphatase.
 
 
 0.824
Caur_2653
PFAM: Stage II sporulation E family protein; Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: rrs:RoseRS_2766 protein phosphatase 2C domain protein.
 
 
 0.824
Caur_2654
PFAM: Stage II sporulation E family protein; Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: rca:Rcas_2391 protein serine/threonine phosphatase.
 
 
 0.824
Caur_3816
PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: rca:Rcas_2163 protein serine/threonine phosphatase.
 
 
 0.824
Caur_2503
PFAM: WD-40 repeat protein; SMP-30/Gluconolaconase/LRE domain protein; KEGG: rrs:RoseRS_0892 WD-40 repeat protein.
 
    0.816
Caur_1717
PFAM: SH3 type 3 domain protein; SMART: serine/threonine protein kinase; KEGG: rrs:RoseRS_1259 protein kinase.
  
     0.775
Caur_1989
PFAM: Forkhead-associated protein; KEGG: rrs:RoseRS_1781 FHA domain containing protein.
 
 
   0.745
Caur_1988
PFAM: Forkhead-associated protein; KEGG: rca:Rcas_2060 FHA domain containing protein.
 
 
   0.682
Caur_1775
PFAM: Forkhead-associated protein; peptidase C11 clostripain; KEGG: rrs:RoseRS_1520 FHA domain containing protein.
 
 
   0.601
Caur_1127
PFAM: Forkhead-associated protein; adenylyl cyclase class-3/4/guanylyl cyclase; GAF domain protein; KEGG: rrs:RoseRS_1638 putative adenylate/guanylate cyclase.
 
 
 
 0.594
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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