STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_0036PFAM: phospholipid/glycerol acyltransferase; KEGG: rca:Rcas_2771 phospholipid/glycerol acyltransferase. (227 aa)    
Predicted Functional Partners:
Caur_3570
PFAM: phosphatidate cytidylyltransferase; KEGG: rrs:RoseRS_2014 phosphatidate cytidylyltransferase; Belongs to the CDS family.
 
  
 0.938
Caur_3502
PFAM: phospholipid/glycerol acyltransferase; KEGG: mpt:Mpe_A0484 acyltransferase, putative.
  
  
 
0.926
Caur_0632
PFAM: diacylglycerol kinase; KEGG: rrs:RoseRS_3595 diacylglycerol kinase.
    
 0.906
Caur_3291
TIGRFAM: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit; PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: rca:Rcas_4111 FAD dependent oxidoreductase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 
 0.831
GlpC
TIGRFAM: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: rrs:RoseRS_3301 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
     
  0.800
Caur_3290
KEGG: rca:Rcas_4112 glycerol-3-phosphate dehydrogenase; TIGRFAM: glycerol-3-phosphate dehydrogenase, anaerobic, B subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein.
     
  0.800
Caur_0039
KEGG: rrs:RoseRS_2063 hypothetical protein.
     
 0.783
Caur_0037
KEGG: rrs:RoseRS_2830 hypothetical protein.
       0.773
Caur_0038
PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: mxa:MXAN_2845 conserved hypothetical protein TIGR00257.
       0.773
cmk
KEGG: rrs:RoseRS_0324 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region.
    
 0.669
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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