STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_0045KEGG: rrs:RoseRS_2617 hypothetical protein. (357 aa)    
Predicted Functional Partners:
Caur_0046
PFAM: protein of unknown function DUF407; KEGG: rrs:RoseRS_2616 protein of unknown function DUF407.
 
     0.878
Caur_3581
Glutamate--cysteine ligase GCS2; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.
 
   
 0.822
Caur_3902
KEGG: rca:Rcas_1799 putative esterase.
 
     0.780
Caur_0047
PFAM: periplasmic binding protein; KEGG: rca:Rcas_2937 periplasmic binding protein.
       0.567
Caur_0048
PFAM: protein of unknown function DUF547; KEGG: gur:Gura_3347 protein of unknown function DUF547.
       0.552
Caur_0049
KEGG: gur:Gura_0093 hypothetical protein.
       0.541
Caur_0050
KEGG: bbr:BB4888 putative reductase.
       0.506
Caur_0720
Hypothetical protein; KEGG: rca:Rcas_3348 PKD domain containing protein.
  
     0.446
Caur_0044
Phosphomannomutase; PFAM: phosphoglucomutase/phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: rca:Rcas_1218 phosphomannomutase.
       0.419
Caur_0222
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rba:RB5051 conserved hypothetical protein-putative thioredoxin reductase.
  
   
 0.406
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.