Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Caur_0073Tetratricopeptide TPR_4; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein; KEGG: sus:Acid_3454 tetratricopeptide TPR_4. (929 aa)    
Predicted Functional Partners:
Caur_0072
TIGRFAM: RNA polymerase sigma factor, sigma-70 family.
       0.773
Caur_0785
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_2583 tetratricopeptide TPR_2 repeat protein.
  
     0.668
Caur_3416
NB-ARC domain protein; PFAM: TPR repeat-containing protein; NB-ARC domain protein; peptidase C14 caspase catalytic subunit p20; Tetratricopeptide TPR_3; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_0641 tetratricopeptide TPR_2 repeat protein.
  
     0.662
Caur_0074
PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: gvi:gll3709 polysaccharide transporter, PST family.
       0.620
Caur_3454
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_0641 tetratricopeptide TPR_2 repeat protein.
 
     0.616
Caur_2875
PFAM: WD-40 repeat protein; KEGG: mac:MA2525 WD40-repeat containing protein.
  
     0.590
Caur_3820
PFAM: TPR repeat-containing protein; transcriptional activator domain; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rca:Rcas_3701 transcriptional regulator, SARP family.
  
     0.561
Caur_2503
PFAM: WD-40 repeat protein; SMP-30/Gluconolaconase/LRE domain protein; KEGG: rrs:RoseRS_0892 WD-40 repeat protein.
  
     0.525
Caur_0885
Hypothetical protein; KEGG: rrs:RoseRS_2583 tetratricopeptide TPR_2 repeat protein.
  
     0.503
Caur_0605
PFAM: TPR repeat-containing protein; SMART: helix-turn-helix domain protein; Tetratricopeptide domain protein; KEGG: rxy:Rxyl_2946 transcriptional regulator, LuxR family.
  
     0.478
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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