Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Caur_0076KEGG: rrs:RoseRS_0742 hypothetical protein. (375 aa)    
Predicted Functional Partners:
Caur_0075
PFAM: D12 class N6 adenine-specific DNA methyltransferase; KEGG: rrs:RoseRS_0743 D12 class N6 adenine-specific DNA methyltransferase.
    
 0.933
Caur_0074
PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: gvi:gll3709 polysaccharide transporter, PST family.
       0.477
Caur_0077
PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_3120 glycosyl transferase, group 1.
       0.429
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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