Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Caur_0085PFAM: protein of unknown function DUF309; KEGG: rca:Rcas_1756 protein of unknown function DUF309. (121 aa)    
Predicted Functional Partners:
Caur_3560
KEGG: rrs:RoseRS_2127 uncharacterized metal-binding protein-like protein.
  
     0.629
Caur_3728
KEGG: syc:syc1675_d hypothetical protein.
  
     0.506
Caur_0392
TIGRFAM: conserved repeat domain protein; SMART: Parallel beta-helix repeat; KEGG: rca:Rcas_3732 parallel beta-helix repeat.
  
     0.437
Caur_3366
KEGG: rrs:RoseRS_2621 hypothetical protein.
  
     0.435
Caur_3179
PFAM: Thrombospondin type 3 repeat; Cna B domain protein; KEGG: rrs:RoseRS_4292 Cna B domain protein.
  
     0.407
Caur_0712
PFAM: Tetratricopeptide TPR_4; KEGG: rrs:RoseRS_2658 glycosyl transferase, family 39.
  
     0.400
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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