STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_0100FeoA family protein; PFAM: iron dependent repressor; FeoA family protein; KEGG: rca:Rcas_3322 iron (metal) dependent repressor, DtxR family. (233 aa)    
Predicted Functional Partners:
Caur_1714
PFAM: ferric-uptake regulator; KEGG: rrs:RoseRS_1293 ferric uptake regulator, Fur family; Belongs to the Fur family.
  
  
 0.640
Caur_2431
PFAM: iron dependent repressor; KEGG: rrs:RoseRS_3574 iron dependent repressor.
 
  
0.621
Caur_0197
PFAM: periplasmic solute binding protein; KEGG: rrs:RoseRS_3070 periplasmic solute binding protein; Belongs to the bacterial solute-binding protein 9 family.
  
  
 0.575
Caur_1993
PFAM: periplasmic solute binding protein; KEGG: pla:Plav_2227 periplasmic solute binding protein; Belongs to the bacterial solute-binding protein 9 family.
  
  
 0.575
Caur_1176
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
 
  
 0.564
Caur_0894
ATP-binding region ATPase domain protein; PFAM: helix-turn-helix- domain containing protein AraC type; periplasmic binding protein/LacI transcriptional regulator; response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_0204 integral membrane sensor hybrid histidine kinase.
  
  
 0.539
Caur_0101
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rle:RL0373 putative enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.527
Caur_3564
Redoxin domain protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
  
  
 0.495
Caur_0196
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_3069 ABC transporter related.
  
  
 0.494
Caur_1994
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcl:ABC3960 Mn2+/Zn2+ ABC transporter ATP-binding protein.
  
  
 0.494
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.