Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Caur_0136Hypothetical protein. (166 aa)    
Predicted Functional Partners:
Caur_0137
TIGRFAM: C-20 methyltransferase BchU; PFAM: O-methyltransferase family 2; KEGG: cte:CT0028 CrtF-related protein.
       0.683
Caur_0135
Putative lipase; KEGG: tel:tlr1982 probable lipase.
       0.673
Caur_0134
Putative lipase; KEGG: tel:tlr1982 probable lipase.
       0.668
Caur_0133
Hypothetical protein.
       0.605
Caur_0132
Hypothetical protein.
       0.571
Caur_0131
PFAM: alpha/beta hydrolase fold; KEGG: pvi:Cvib_1124 alpha/beta hydrolase fold.
       0.551
Caur_0138
TIGRFAM: bacteriochlorophyll/chlorophyll synthetase; PFAM: UbiA prenyltransferase; KEGG: cch:Cag_1538 bacteriochlorophyll a synthase.
       0.551
Caur_0130
PFAM: Anion-transporting ATPase; KEGG: rca:Rcas_0926 ATPase involved in chromosome partitioning-like protein.
       0.527
Caur_0139
Hypothetical protein.
       0.477
Caur_0140
Hypothetical protein.
       0.428
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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