STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_0140Hypothetical protein. (145 aa)    
Predicted Functional Partners:
Caur_0139
Hypothetical protein.
     
 0.828
Caur_0142
KEGG: ter:Tery_0501 hypothetical protein.
     
 0.665
Caur_0138
TIGRFAM: bacteriochlorophyll/chlorophyll synthetase; PFAM: UbiA prenyltransferase; KEGG: cch:Cag_1538 bacteriochlorophyll a synthase.
       0.626
cmsA
Bacteriochlorophyll C binding protein; Component of the photosynthetic apparatus. The light harvesting B740 complex binds bacteriochlorophyll c.
     
 0.523
Caur_0137
TIGRFAM: C-20 methyltransferase BchU; PFAM: O-methyltransferase family 2; KEGG: cte:CT0028 CrtF-related protein.
       0.460
Caur_0141
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bcy:Bcer98_3646 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
       0.447
Caur_0356
PFAM: ferredoxin; KEGG: cte:CT0652 chlorosome envelope protein X.
      
 0.441
Caur_1311
Hypothetical protein.
      
 0.441
acsF
Magnesium-protoporphyrin IX monomethyl ester aerobic oxidative cyclase; Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME); Belongs to the AcsF family.
      
 0.440
Caur_0136
Hypothetical protein.
       0.429
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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