STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_0145PFAM: ABC-2 type transporter; KEGG: mth:MTH1092 ABC-2 type transport system permease protein. (251 aa)    
Predicted Functional Partners:
Caur_0146
KEGG: mem:Memar_0243 daunorubicin resistance ABC transporter ATPase subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
 0.964
Caur_0637
PFAM: nitroreductase; KEGG: dge:Dgeo_1628 nitroreductase.
  
  
 0.698
Caur_3170
PFAM: nitroreductase; KEGG: mca:MCA1372 nitroreductase family protein; Belongs to the flavin oxidoreductase frp family.
  
  
 0.698
Caur_3614
PFAM: nitroreductase; KEGG: rrs:RoseRS_1137 nitroreductase.
  
  
 0.698
Caur_3031
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: deb:DehaBAV1_0253 ABC transporter related.
 
  
 0.683
Caur_0272
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_4617 ABC transporter related.
 
  
 0.673
Caur_1588
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rca:Rcas_1669 ABC transporter related.
 
  
 0.606
Caur_2713
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rca:Rcas_0970 ABC transporter related.
 
  
 0.519
Caur_3059
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rxy:Rxyl_0089 ABC transporter related.
 
  
 0.516
Caur_0969
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rca:Rcas_3059 ABC transporter related.
 
  
 0.510
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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