STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_0146KEGG: mem:Memar_0243 daunorubicin resistance ABC transporter ATPase subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase. (315 aa)    
Predicted Functional Partners:
Caur_0145
PFAM: ABC-2 type transporter; KEGG: mth:MTH1092 ABC-2 type transport system permease protein.
 
  
 0.964
Caur_1627
KEGG: rrs:RoseRS_0416 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
     
0.804
Caur_0932
PFAM: inner-membrane translocator; KEGG: rrs:RoseRS_2977 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
      0.767
Caur_1083
PFAM: inner-membrane translocator; KEGG: rrs:RoseRS_0625 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
      0.754
Caur_3638
PFAM: inner-membrane translocator; KEGG: rrs:RoseRS_4108 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
      0.702
Caur_3060
KEGG: aau:AAur_3049 putative ABC transporter, permease protein.
  
 
 0.561
Caur_0478
KEGG: rrs:RoseRS_2418 hypothetical protein.
  
 
 0.446
Caur_2041
PFAM: ABC-2 type transporter; KEGG: rca:Rcas_3060 hypothetical protein.
  
 
 0.446
Caur_2470
KEGG: rca:Rcas_0725 ABC-type transport system involved in multi-copper enzyme maturation permease component-like protein.
  
 
 0.446
Caur_3032
PFAM: ABC-2 type transporter; KEGG: deh:cbdb_A134 ABC transporter, permease protein.
  
  
 0.417
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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