STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
Caur_0155PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rxy:Rxyl_2574 methyltransferase type 12. (287 aa)    
Predicted Functional Partners:
Caur_0157
PFAM: bifunctional deaminase-reductase domain protein; KEGG: rxy:Rxyl_2578 riboflavin-specific deaminase-like protein.
     
 0.790
Caur_0156
Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
       0.789
Caur_0154
KEGG: rrs:RoseRS_3314 hypothetical protein.
  
    0.773
Caur_0160
PFAM: glycosyl transferase group 1; KEGG: rxy:Rxyl_2575 glycosyl transferase, group 1.
      0.713
Caur_0158
PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: rxy:Rxyl_2577 alcohol dehydrogenase, zinc-binding protein.
     
 0.693
Caur_1819
PFAM: Lycopene beta and epsilon cyclase; KEGG: fjo:Fjoh_0926 lycopene beta and epsilon cyclase.
  
 0.665
Caur_0153
KEGG: sfu:Sfum_3916 dual specificity protein phosphatase.
  
    0.545
Caur_1432
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rca:Rcas_3605 methyltransferase type 11.
  
 
   0.418
Caur_0159
PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: rxy:Rxyl_2576 6-pyruvoyl tetrahydropterin synthase and hypothetical protein.
       0.407
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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