Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Caur_0191KEGG: cya:CYA_0515 hypothetical protein. (161 aa)    
Predicted Functional Partners:
Caur_3862
KEGG: fno:Fnod_1596 hypothetical protein.
  
     0.564
Caur_3832
KEGG: rxy:Rxyl_0417 hypothetical protein.
  
  
 0.513
Caur_2765
PFAM: nitrogen-fixing NifU domain protein; Rieske [2Fe-2S] domain protein; KEGG: rca:Rcas_3799 nitrogen-fixing NifU domain protein.
  
  
 0.505
Caur_3861
PFAM: NHL repeat containing protein; KEGG: fno:Fnod_0291 NHL repeat containing protein.
 
  
 0.496
Caur_3258
PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: rca:Rcas_1903 glutamate synthase (ferredoxin).
     
 0.491
Caur_2995
Hypothetical protein.
  
  
 0.490
Caur_3880
PFAM: FAD dependent oxidoreductase; KEGG: rrs:RoseRS_0964 FAD dependent oxidoreductase.
 
   
 0.490
Caur_3857
PFAM: extracellular solute-binding protein family 1; KEGG: pho:PH0753 multiple sugar transport system substrate-binding protein.
  
     0.480
Caur_3858
PFAM: extracellular solute-binding protein family 1; KEGG: fno:Fnod_0294 extracellular solute-binding protein family 1.
  
     0.444
Caur_0894
ATP-binding region ATPase domain protein; PFAM: helix-turn-helix- domain containing protein AraC type; periplasmic binding protein/LacI transcriptional regulator; response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_0204 integral membrane sensor hybrid histidine kinase.
  
  
 0.440
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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