Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Caur_0219PFAM: Rare lipoprotein A; KEGG: rca:Rcas_2307 rare lipoprotein A. (258 aa)    
Predicted Functional Partners:
Caur_0018
PFAM: protein of unknown function DUF574; KEGG: rrs:RoseRS_1762 protein of unknown function DUF574.
  
     0.646
Caur_0267
KEGG: rrs:RoseRS_2393 polymorphic outer membrane protein.
  
     0.581
Caur_3913
KEGG: rca:Rcas_2246 hypothetical protein.
  
     0.529
Caur_0220
TIGRFAM: oligoendopeptidase F; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; Oligopeptidase F; KEGG: dge:Dgeo_1084 oligoendopeptidase F.
       0.517
Caur_2607
KEGG: rca:Rcas_3864 hypothetical protein.
  
     0.514
Caur_2094
Histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_1307 response regulator receiver sensor signal transduction histidine kinase.
  
     0.512
Caur_2337
KEGG: rca:Rcas_0264 regulator of chromosome condensation RCC1.
  
     0.510
Caur_3050
PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rrs:RoseRS_4121 ErfK/YbiS/YcfS/YnhG family protein.
  
     0.470
Caur_0378
PFAM: aminoglycoside phosphotransferase; KEGG: afm:AFUA_3G11050 hypothetical protein.
  
     0.458
Caur_2707
KEGG: rca:Rcas_4414 metallophosphoesterase.
  
     0.425
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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