STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Caur_0239Non-specific serine/threonine protein kinase; KEGG: rca:Rcas_0671 putative circadian clock protein, KaiC; PFAM: Circadian clock protein KaiC central region; KaiA binding; SMART: AAA ATPase. (482 aa)    
Predicted Functional Partners:
Caur_2496
PFAM: KaiB domain protein; KEGG: mma:MM_1091 thiol-disulfide isomerase.
 
 
 
 0.946
Caur_3275
PFAM: KaiB domain protein; KEGG: rca:Rcas_4149 KaiB domain protein.
 
 
 
 0.946
Caur_0527
PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: eba:ebA2987 putative two component sensor.
   
 
 0.735
Caur_3536
PAS sensor protein; KEGG: rrs:RoseRS_3061 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
   
 
 0.727
Caur_0238
KEGG: sfu:Sfum_1007 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
     
 0.566
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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