STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_0296KEGG: rca:Rcas_0402 hypothetical protein. (302 aa)    
Predicted Functional Partners:
Caur_0297
KEGG: mlo:mlr7467 hypothetical protein.
       0.691
Caur_0117
KEGG: mba:Mbar_A1776 magnesium-chelatase subunit; PFAM: magnesium chelatase ChlI subunit; von Willebrand factor type A; SMART: AAA ATPase.
  
 
 0.449
Caur_0419
Magnesium chelatase ATPase subunit I; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
  
 
 0.449
Caur_0420
Magnesium chelatase ATPase subunit D; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
  
 
 0.449
Caur_1255
KEGG: rca:Rcas_4086 magnesium chelatase; PFAM: magnesium chelatase ChlI subunit; SMART: AAA ATPase.
  
 
 0.449
Caur_0295
KEGG: rrs:RoseRS_1018 hypothetical protein.
       0.427
Caur_0298
TIGRFAM: polymorphic outer membrane protein; PFAM: Polymorphic membrane protein Chlamydia; KEGG: rrs:RoseRS_4272 hypothetical protein.
       0.406
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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