STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_0323PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: hma:rrnAC0908 spermidine/putrescine ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (369 aa)    
Predicted Functional Partners:
Caur_0324
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hha:Hhal_1189 binding-protein-dependent transport systems inner membrane component.
 
 0.990
Caur_0325
PFAM: extracellular solute-binding protein family 1; KEGG: nmu:Nmul_A0732 extracellular solute-binding protein, family 1.
 
 
 0.985
Caur_1682
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_1642 binding-protein-dependent transport systems inner membrane component.
 
 0.949
Caur_1683
Ornithine carbamoyltransferase; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_1644 ornithine carbamoyltransferase.
  
 0.945
Caur_2491
Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
  
 0.935
Caur_1153
KEGG: tpt:Tpet_0895 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
    
0.907
Caur_1135
PFAM: extracellular solute-binding protein family 1; KEGG: ter:Tery_2816 extracellular solute-binding protein, family 1.
  
 0.807
Caur_1769
PFAM: extracellular solute-binding protein family 1; KEGG: hch:HCH_02206 spermidine/putrescine-binding periplasmic protein.
  
 0.807
Caur_1684
PFAM: extracellular solute-binding protein family 1; KEGG: rrs:RoseRS_1645 extracellular solute-binding protein, family 1.
  
 0.805
Caur_1768
PFAM: extracellular solute-binding protein family 1; KEGG: hch:HCH_02206 spermidine/putrescine-binding periplasmic protein.
  
 0.798
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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