STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_0325PFAM: extracellular solute-binding protein family 1; KEGG: nmu:Nmul_A0732 extracellular solute-binding protein, family 1. (376 aa)    
Predicted Functional Partners:
Caur_0324
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hha:Hhal_1189 binding-protein-dependent transport systems inner membrane component.
 
 
 0.998
Caur_0323
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: hma:rrnAC0908 spermidine/putrescine ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.985
Caur_3585
PFAM: major facilitator superfamily MFS_1; KEGG: stp:Strop_0632 major facilitator superfamily MFS_1.
  
  
 0.791
Caur_0636
PFAM: iron permease FTR1; KEGG: rca:Rcas_0820 iron permease FTR1.
   
  
 0.649
potA
Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
  
 0.557
Caur_2333
PFAM: extracellular solute-binding protein family 5; KEGG: rca:Rcas_0320 extracellular solute-binding protein family 5.
      
 0.554
Caur_0786
PFAM: extracellular solute-binding protein family 5; KEGG: rca:Rcas_0383 extracellular solute-binding protein family 5.
      
 0.514
Caur_0791
PFAM: extracellular solute-binding protein family 5; KEGG: rrs:RoseRS_2770 extracellular solute-binding protein, family 5.
      
 0.514
Caur_1149
PFAM: extracellular solute-binding protein family 5; KEGG: rrs:RoseRS_0937 extracellular solute-binding protein, family 5.
      
 0.514
Caur_1156
PFAM: extracellular solute-binding protein family 5; KEGG: tpe:Tpen_1676 extracellular solute-binding protein, family 5.
      
 0.514
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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