STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
Caur_0428Methyltransferase type 11; PFAM: Methionine biosynthesis MetW protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_1837 methyltransferase type 12. (268 aa)    
Predicted Functional Partners:
Caur_0740
PFAM: Methyltransferase type 11; KEGG: rrs:RoseRS_2472 methyltransferase type 11.
  
     0.631
Caur_0429
PFAM: membrane protein of unknown function; KEGG: rrs:RoseRS_3547 membrane protein of unknown function.
       0.544
Caur_0710
KEGG: rca:Rcas_1943 membrane protein-like protein.
  
     0.526
Caur_0712
PFAM: Tetratricopeptide TPR_4; KEGG: rrs:RoseRS_2658 glycosyl transferase, family 39.
  
     0.505
Caur_0711
KEGG: rrs:RoseRS_2657 hypothetical protein.
  
     0.492
Caur_2529
KEGG: rrs:RoseRS_2034 hypothetical protein.
  
     0.483
Caur_0918
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rca:Rcas_3055 methyltransferase type 11.
  
     0.481
Caur_1511
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mca:MCA2546 hypothetical protein.
  
 
   0.481
Caur_1608
PFAM: PHP domain protein; AAA-4 family protein; SMART: phosphoesterase PHP domain protein; KEGG: rrs:RoseRS_1312 AAA-4 family protein.
 
    0.470
Caur_2544
KEGG: rca:Rcas_1976 hypothetical protein.
  
     0.444
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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