STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_0459PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: rrs:RoseRS_2296 stage II sporulation E family protein. (192 aa)    
Predicted Functional Partners:
Caur_0458
PFAM: ATP-binding region ATPase domain protein; KEGG: rrs:RoseRS_2297 putative anti-sigma regulatory factor, serine/threonine protein kinase.
 
 
 0.972
Caur_2665
PFAM: ATP-binding region ATPase domain protein; KEGG: rca:Rcas_0675 putative anti-sigma regulatory factor, serine/threonine protein kinase.
 
 0.891
Caur_0857
PAS sensor protein; KEGG: rrs:RoseRS_3536 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
 
 
 0.877
Caur_1657
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; PAS fold-4 domain protein; PAS fold domain protein; KEGG: rca:Rcas_1037 putative PAS/PAC sensor protein.
 
 
 0.871
Caur_3185
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; PAS fold-4 domain protein; KEGG: rca:Rcas_2373 putative PAS/PAC sensor protein.
 
 
 0.871
Caur_1289
PAS sensor protein; KEGG: rrs:RoseRS_4189 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; PAS fold-3 domain protein; SMART: PAC repeat-containing protein.
 
 
 0.870
Caur_3878
PAS sensor protein; KEGG: rrs:RoseRS_4199 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
 
 
 0.867
Caur_1559
PAS sensor protein; KEGG: rrs:RoseRS_3536 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
 
 
 0.865
Caur_3459
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; histidine kinase HAMP region domain protein; KEGG: rca:Rcas_3858 anti-sigma-factor antagonist.
 
   0.859
Caur_0842
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rca:Rcas_2715 anti-sigma-factor antagonist.
  
   0.857
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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