STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_0481TIGRFAM: biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; KEGG: rrs:RoseRS_4051 biotin--acetyl-CoA-carboxylase ligase. (283 aa)    
Predicted Functional Partners:
Caur_3421
acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
 0.869
Caur_1378
acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
 0.864
Caur_2832
PFAM: biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: rrs:RoseRS_0434 carbamoyl-phosphate synthase L chain, ATP-binding.
  
 0.852
Caur_2007
PFAM: phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; KEGG: ade:Adeh_2440 biotin carboxylase-like.
  
 0.719
Caur_1990
PFAM: peptidase M22 glycoprotease; KEGG: rrs:RoseRS_4358 peptidase M22, glycoprotease.
  
    0.715
Caur_3433
PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: pho:PH1284 methylmalonyl-CoA decarboxylase gamma chain.
 
  
 0.701
Caur_3435
Propionyl-CoA carboxylase; PFAM: carboxyl transferase; KEGG: rrs:RoseRS_3291 carboxyl transferase.
 
 
 0.649
Caur_2360
PFAM: carboxyl transferase; KEGG: rrs:RoseRS_3291 carboxyl transferase.
 
 
 0.643
Caur_3055
PFAM: carboxyl transferase; KEGG: aba:Acid345_3025 carboxyl transferase.
 
 
 0.639
Caur_2407
TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: gtn:GTNG_1042 malonyl CoA-acyl carrier protein transacylase (FabD).
 
   
 0.614
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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