Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Caur_0482TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: rrs:RoseRS_0131 cell envelope-related transcriptional attenuator. (371 aa)    
Predicted Functional Partners:
murJ
Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.
 
     0.832
Caur_0464
PFAM: VanW family protein; KEGG: rca:Rcas_2379 VanW family protein.
 
     0.682
Caur_1301
PFAM: VanW family protein; KEGG: rca:Rcas_0036 VanW family protein.
 
     0.681
Caur_1055
PFAM: VanW family protein; KEGG: rrs:RoseRS_0768 VanW family protein.
 
     0.654
recF
DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP.
  
     0.622
Caur_3127
SMART: Helix-hairpin-helix DNA-binding class 1; KEGG: rca:Rcas_1691 competence protein ComEA helix-hairpin-helix repeat protein.
 
     0.587
Caur_1531
PFAM: glycosyl transferase family 4; KEGG: rrs:RoseRS_0580 glycosyl transferase, family 4.
 
  
 0.554
Caur_1518
PFAM: protein of unknown function UPF0052 and CofD; KEGG: rca:Rcas_2718 protein of unknown function UPF0052 and CofD.
  
     0.526
Caur_0431
TIGRFAM: sortase family protein; PFAM: peptidase C60 sortase A and B; KEGG: rca:Rcas_1727 sortase family protein.
  
   
 0.518
Caur_1786
Protein of unknown function UPF0052 and CofD; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.
  
     0.512
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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