STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_0516KEGG: art:Arth_3416 hypothetical protein. (228 aa)    
Predicted Functional Partners:
Caur_0517
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: rca:Rcas_4246 alpha amylase catalytic region.
       0.645
Caur_0518
KEGG: gvi:gll2767 hypothetical protein.
       0.645
Caur_0519
KEGG: ade:Adeh_2155 hypothetical protein.
       0.645
Caur_1990
PFAM: peptidase M22 glycoprotease; KEGG: rrs:RoseRS_4358 peptidase M22, glycoprotease.
  
    0.556
Caur_0584
PFAM: PBS lyase HEAT domain protein repeat-containing protein; KEGG: reu:Reut_A2011 hypothetical protein.
  
     0.536
Caur_0736
Hypothetical protein.
  
     0.532
Caur_1035
PFAM: GAF domain protein; KEGG: rrs:RoseRS_2414 GAF sensor signal transduction histidine kinase.
 
 
   0.527
Caur_0515
PFAM: alpha/beta hydrolase fold; KEGG: rrs:RoseRS_2485 alpha/beta hydrolase fold.
       0.511
Caur_3506
KEGG: rrs:RoseRS_2746 hypothetical protein.
 
    0.510
Caur_0389
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sme:SMc00267 hypothetical protein.
 
   
 0.496
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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